UPDATE: The SES has received multiple calls for assistance at Wangaratta after heavy rainfall in the area.
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Volunteers have been called to eight jobs as a flood watch remains active in the area.
None of the incidents have been particularly serious, with most for minor building damage caused by water.
SES North East duty officer Dan Walton said sudden and heavy downpours had likely led to water entering some homes as gutters failed to cope.
"We've got crews responding to those jobs," he said.
"They'll go to the properties and make assessments and discuss the situation with the homeowners."
A severe thunderstorm warning remains in place.
"Those dumps of rain, we can't really predict where they will hit," he said.
"Everyone should have plans in place and be ready.
"When you get isolated thunderstorm cells, especially with the high atmosphere humidity, you will get lots of rain in a short amount of time.
"That's likely for the rest of the weekend."
Flooding is expected on Saturday.
Anyone needing assistance can call 132 500, and the SES website has tips to prepare properties at https://www.ses.vic.gov.au/get-ready
EARLIER: The Bureau of Meteorology has warned residents in Southern NSW and North East Victoria to prepare for a heavy thunderstorm and possible flash flooding.
The bureau issued severe weather warnings for both areas.
"A low pressure system to Victoria's northwest is directing a humid, unstable airmass across the State and producing thunderstorms in the northeast," the bureau said
"Severe thunderstorms are likely to produce damaging winds and heavy rainfall that may lead to flash flooding in the warning area over the next several hours."
IN OTHER NEWS:
At 1.40pm Yarrawonga recorded wind gusts of 51kt.
The State Emergency Service warned residents should move their cars undercover or away from trees, secure any loose items in their yard and stay clear of any fallen powerlines.
Residents have also been warned to keep clear of creeks and storm drains and to never drive through flood water.